Note: Currently when PAPI finds a MEF-cube, it is collapsed adding the planes upĪrithmetically without any kind of image registration. This mode will be also used when the software or hardware subwindowing is set up and Of coadds (NCOADDS), i.e., a cube of N planes. One per each detector (or window), having each extension N planes, where N is the number Non-integrated Multi-Extension-FITS (MEF): a unique FITS file with four extensions (MEF), Then, there will be an extension for each sub-window. This mode will also be used when the software or hardware sub-windowing is set and Is the default and more wished saving mode. This is the default and more common saving mode used in fact, it If the number of coadd (NCOADDS) is > 0, then they will be integrated (arithmetic sum) Where each extension corresponds to one of the 4 images produced by the single Integrated Multi-Extension-FITS (MEF): a unique FITS file with four extensions (MEF), Next ones are available in the OT when the OP (Observing Program) GEIRS is capable of saving the frames in different modes (integrated, FITS-cubes, W DETECTOR, - window_detector = DETECTOR Specify which detector to process : Q1 ( SG1 ), Q2 ( SG2 ), Q3 ( SG3 ), Q4 ( SG4 ), Q123 ( all except SG4 ), all - p, - print Print all detected sequences in the Data Set - T SEQ_TYPE, - sequences_type = SEQ_TYPE Specify the type of sequences to show : DARK, FLAT ( all ), DOME_FLAT, SKY_FLAT, FOCUS, SCIENCE, CAL, all - b, - build_calibrations Build all the master calibrations files - C EXT_CALIBRATION_DB, - ext_calibration_db = EXT_CALIBRATION_DB External calibration directory ( library of Dark & Flat calibrations ) - D MASTER_DARK, - master_dark = MASTER_DARK Master dark to subtract - F MASTER_FLAT, - master_flat = MASTER_FLAT Master flat to divide by - B BPM_FILE, - bpm_file = BPM_FILE Bad pixel mask file - g GROUP_BY, - group_by = GROUP_BY kind of data grouping ( based on ) to do with thedataset files ( ot | filter ) - k, - check_data if true, check data properties matching ( type, expt, filter, ncoadd, mjd ) - e, - Check Check if versions of PAPI modules are right. By default, all sequences found will be reduced. m OBS_MODE, - obs_mode = OBS_MODE Observing mode ( dither | ext_dither | other ) - S SEQ_TO_REDUCE, - seq_to_reduce = SEQ_TO_REDUCE Sequence number to reduce. d OUTPUT_DIR, - out_dir = OUTPUT_DIR Output dir for product files - o OUTPUT_FILE, - output_file = OUTPUT_FILE Final reduced output image - t TEMP_DIR, - temp_dir = TEMP_DIR Directory for temporal files - r ROWS, - rows = ROWS Use _only_ files of the source file - list in the rangeof rows specified ( 0 to N, both included ) - R, - recursive Does recursive search for files in source directory - l, - list Generate a list with all the source files read fromthe source and sorted by MJD - M REDUCTION_MODE, - red_mode = REDUCTION_MODE Mode of data reduction to do ( quick | science | lab | lemon | quick - lemon ). s SOURCE, - source = SOURCE Source file list of data frames. If not specified, './config_files/papi.cfg' is used. This is PAPI, the PANIC PIpeline data reduction system - IAA - CSIC - Version 0508064845 Options : - version show program 's version number and exit - h, - help show this help message and exit - c CONFIG_FILE, - config = CONFIG_FILE Config file for the PANIC Pipeline application.
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